Insertion junction: CLIP2.047213_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.047213
Chromosome:chromosome 3
Location:8915723
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g204913 (1 of 2) PTHR21580//PTHR21580:SF21 - SHIPPO-1-RELATED // O(6)-METHYLGUANINE-INDUCED APOPTOSIS 2 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAAGCCAGAGGTTGGCACCCATGCATGCATGCAGGCGGGCAGGCAGGCGG
Internal bar code:GGTTTGGGTAGAGCTGAGCTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:557
LEAP-Seq percent confirming:27.2727
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:CGGCTGTGTGTTGGGAGTAT
Suggested primer 2:GCTGAAATGCTGGTCCTCCT