Insertion junction: CLIP2.047215_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.047215
Chromosome:chromosome 10
Location:4982453
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g454300 (1 of 1) IPR003613//IPR011009 - U box domain // Protein kinase-like domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGCGGTGGGTGCGTTTACATCGGCCGTCTTGACGCAGCTGCCGGTGGCG
Internal bar code:ATATCAGGTTAAATACTAGTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:2808
LEAP-Seq percent confirming:61.1111
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:CTCGCATGCATTCCACAGTG
Suggested primer 2:CGCTCCATTCTGCATGAACG