Insertion junction: CLIP2.047219_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.047219
Chromosome:chromosome 10
Location:6397567
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g464350 (1 of 1) PF00098//PF06839 - Zinc knuckle (zf-CCHC) // GRF zinc finger (zf-GRF) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGGACCTGCTGGGGGTCGCCCGGGCCGCCAGCGCCGGCGCCGGCACCGG
Internal bar code:ATAGGTTTGCACTGTCGAGTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:1898
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:40
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:TGCAAGTCTCTTGGCTAGCC
Suggested primer 2:CCCTTTGCTTCAGTTTGGGC