Insertion junction: CLIP2.047226_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.047226
Chromosome:chromosome 5
Location:2451724
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g238900 HEL25 (1 of 1) K14779 - ATP-dependent RNA helicase DDX52/ROK1 [EC:3.6.4.13] (DDX52, ROK1); DEAD/DEAH box helicase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGATACCAGAGGAGGGTGTCGGTTGTTGGTCACCCAGTCGCTCACCGGTG
Internal bar code:CCGGATTATTTTGTATATCTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1491
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:ATCAGAGGGAGACAGAGCGT
Suggested primer 2:TGAAGAAGGTGATGGCCTCG