Insertion junction: CLIP2.047227_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.047227
Chromosome:chromosome 6
Location:8076776
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g305251 (1 of 1) IPR001680//IPR011045//IPR017986 - WD40 repeat // Nitrous oxide reductase, N-terminal // WD40-repeat-containing domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGAATCTCTTGATTGCGTGCTGTCGCTGCTCGCTCGGCGCCACCCGCAG
Internal bar code:GCTCCACGCCAGAAAGTGGTCC

Confirmation - LEAP-Seq

LEAP-Seq distance:3791
LEAP-Seq percent confirming:54.5455
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:AGCAAGGATTTGGAGGAGGC
Suggested primer 2:GGTCATACCGCAACACCAGA