Insertion junction: CLIP2.047228_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.047228
Chromosome:chromosome 11
Location:1555970
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g468383 (1 of 1) PTHR22844//PTHR22844:SF176 - F-BOX AND WD40 DOMAIN PROTEIN // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTATGGCGTGGGATGGAGTTGGCTTCAGAGCGCGAAGGACGCGGAGCACC
Internal bar code:TTGTACTGGAAGTATGGCACAT

Confirmation - LEAP-Seq

LEAP-Seq distance:569
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:ATGAAGAGGGACGGGGATGA
Suggested primer 2:AACTCCCAACATGTAGCCCG