Insertion junction: CLIP2.047245_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.047245
Chromosome:chromosome 7
Location:5434702
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g350750 PTO1,PTOX1 (1 of 2) K17893 - ubiquinol oxidase (AOX1, AOX2); Plastid terminal oxidase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCTCACGCAAGGGCCTCGCTGGCCCAGCGCCATAGGCGCCATTGAATCC
Internal bar code:AGTAAGTGTTAACATGGACCCC

Confirmation - LEAP-Seq

LEAP-Seq distance:4690
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:51
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:51

Suggested primers for confirmation by PCR

Suggested primer 1:TACTTCCTCCTCGAGCTGCT
Suggested primer 2:TGGAGGAGTCGAGGGCATTA