Insertion junction: CLIP2.047258_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.047258
Chromosome:chromosome 2
Location:5157266
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g111850 (1 of 5) PF00536 - SAM domain (Sterile alpha motif) (SAM_1) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCAGCTGCTGCACCGTGACTTGGTGTCGCGTGTGGCGGCCATGGCGGCT
Internal bar code:AAGGGGCTTCCATTTTTTGTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:5725
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:55
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:55

Suggested primers for confirmation by PCR

Suggested primer 1:ATCGCCAGAAGCTCATCTCG
Suggested primer 2:CATCATGGCGCAACTGTCAG