Insertion junction: CLIP2.047272_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.047272
Chromosome:chromosome 2
Location:6726445
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g387541 (1 of 33) IPR015797 - NUDIX hydrolase domain-like CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGCACATGAGGAGACGCACAGGCTGTTGCACACAGAGCAAGTGCGCGAG
Internal bar code:GCTAAGGTGCTAGGAGTCCGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:3330
LEAP-Seq percent confirming:73.0769
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:TCCCAACCTCCGTTACGTTG
Suggested primer 2:GCAGCAGGTAAGGGTGTCAT