Insertion junction: CLIP2.047274_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.047274
Chromosome:chromosome 4
Location:3958394
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g231516 (1 of 1) PTHR23315//PTHR23315:SF84 - BETA CATENIN-RELATED ARMADILLO REPEAT-CONTAINING // ANKYRIN AND ARMADILLO REPEAT-CONTAINING PROTEIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCTACAGCCCCCTGCATCCCGCCCCCTTGCCCCCCTCACCCTCAGCTTG
Internal bar code:AAGGCGCTCGTTGATCATAGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:449
LEAP-Seq percent confirming:75.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:GGTCGGAGAAAAGCGATCGA
Suggested primer 2:CAACCCTCCCATCCCTCAAC