Insertion junction: CLIP2.047275_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.047275
Chromosome:chromosome 7
Location:2204044
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g327200 (1 of 3) PF00534//PF13579 - Glycosyl transferases group 1 (Glycos_transf_1) // Glycosyl transferase 4-like domain (Glyco_trans_4_4) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTATTCGAAGCGCTGAAGCGACGGGGTGGAGCAGTTCAGGCGGCATGTT
Internal bar code:GATCATAATGTGCTTTTAACTT

Confirmation - LEAP-Seq

LEAP-Seq distance:732
LEAP-Seq percent confirming:93.1034
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:GTTGCGGCTGTTATGCTAGC
Suggested primer 2:CCGTTCTCCTGTTGACAGCT