Insertion junction: CLIP2.047281_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.047281
Chromosome:chromosome 1
Location:3295027
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g021150 TRMC2,TMU1 (1 of 2) 2.1.1.35 - tRNA (uracil(54)-C(5))-methyltransferase / tRNA:m(5)U(54)-methyltransferase; tRNA (uracil-5-)-methyltransferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCTCATCCCTCGCTCGCCCTGCGTGTCCTCCTTGCATGATGCCCCCCCT
Internal bar code:TTCGTTACTTCGTTGTAAAATG

Confirmation - LEAP-Seq

LEAP-Seq distance:460
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:TTGGGTTCGCTCTAGCAAGG
Suggested primer 2:CCGCATAATACTCCACCCCC