Insertion junction: CLIP2.047282_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.047282
Chromosome:chromosome 9
Location:1272893
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g400851 (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTTCGCCCCCAGGTCAACCTCCTGGTCAGAACTGCCGCCGCCGCCGCCG
Internal bar code:TGAGGTTAAAAGCCCAATGTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:483
LEAP-Seq percent confirming:14.2857
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:30
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:TCTGAGCGGTCTGGATACCA
Suggested primer 2:TGGTCAAAGCCATCACCTCC