Insertion junction: CLIP2.047292_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.047292
Chromosome:chromosome 7
Location:3819415
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g338602 POLH1 (1 of 1) PTHR11076//PTHR11076:SF11 - DNA REPAIR POLYMERASE UMUC / TRANSFERASE FAMILY MEMBER // DNA POLYMERASE ETA; DNA polymerase eta subunit intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGGGTTGTGCTGCAAATCGCATGCTTAGGAGCGAGTGTGGAAAGGCAGG
Internal bar code:CCGATGACGTTATTATATTAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1021
LEAP-Seq percent confirming:16.9811
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:44
LEAP-Seq n unique pos:53

Suggested primers for confirmation by PCR

Suggested primer 1:CCTTATCACACATGCGCACG
Suggested primer 2:GTCTGGGGCGTGTCAATACA