Insertion junction: CLIP2.047294_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.047294
Chromosome:chromosome 1
Location:5461683
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g038600 FAD7 Omega-3-fatty acid desaturase; (1 of 1) K10257 - omega-3 fatty acid desaturase (delta-15 desaturase) (FAD8, desB) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGGCACGATGTCATTACGAGGTGTGGGAGTGCCATAGCGCGCTGCAACG
Internal bar code:GCTTATAATCGTTCACCGAGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1550
LEAP-Seq percent confirming:94.0476
LEAP-Seq n confirming:79
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:84

Suggested primers for confirmation by PCR

Suggested primer 1:GTGCAAGGCCAAACTGTCTG
Suggested primer 2:TGCGCTTCCACAGGTAGAAG