Insertion junction: CLIP2.047295_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.047295
Chromosome:chromosome 12
Location:8539960
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g549150 (1 of 781) IPR000104 - Antifreeze protein, type I intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGAAACGGCAGCAGCAGCGCCACCATCCATGTCGCCGCGGCGCTTGCCG
Internal bar code:ACTCCGGTTTTAGGGCTGTTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:3762
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:CAAGCAGCGCAGTGACAAG
Suggested primer 2:CAGCAGGTTGTGGTTGAAGC