Insertion junction: CLIP2.047297_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.047297
Chromosome:chromosome 3
Location:1433070
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g151000 SEX4,DSP8 Laforin glucan phosphatase, chloroplastic; (1 of 1) PTHR10343//PTHR10343:SF58 - 5'-AMP-ACTIVATED PROTEIN KINASE , BETA SUBUNIT // PHOSPHOGLUCAN PHOSPHATASE DSP4, CHLOROPLASTIC CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTCGGCGCGCTCCTCCTCGGTGAGGTCGCCGCCGGGCTGCAGCAGCCGC
Internal bar code:TAAGTTAGTTAACACTCGTTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1053
LEAP-Seq percent confirming:78.2609
LEAP-Seq n confirming:36
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:46

Suggested primers for confirmation by PCR

Suggested primer 1:GTTGAGGGGTATGGTGGTGG
Suggested primer 2:CTTGGAGTTGTCCTGCGTCT