Insertion junction: CLIP2.047300_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.047300
Chromosome:chromosome 6
Location:5097993
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g282700 (1 of 1) PTHR24414//PTHR24414:SF29 - FAMILY NOT NAMED // SEGMENTATION PROTEIN CAP'N'COLLAR CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTCTGGAGGAGGGCCCCGACAAGGCTATCTACTCGGAGCTACTGCGCCG
Internal bar code:ACACATAGATTTAAGCGTTTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:2372
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:CAGCCCCTAATCTGCGCATA
Suggested primer 2:GCGCGCTACATGACATTTGT