Insertion junction: CLIP2.047302_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.047302
Chromosome:chromosome 3
Location:8538275
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g211409 PPR15,mS106,MRPS106 Mitochondrial ribosomal protein S106, Chlamydomonas specific intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATCATCAATGTAACTCCCCGCGCTCACACACGGCTTACACAGGAGTGCC
Internal bar code:GTTCCTATTGGGGCCGTATCCC

Confirmation - LEAP-Seq

LEAP-Seq distance:1057
LEAP-Seq percent confirming:91.6667
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:GTAACCAGGAAGGGCGTCAA
Suggested primer 2:ACACGTAGATGGTGGCAAGG