Insertion junction: CLIP2.047305_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.047305
Chromosome:chromosome 17
Location:4118809
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g729000 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGCAGCGCGATAGCCACGAGGCCGAGCTGGCGCGGCTGCGGGCGGCGCA
Internal bar code:CCGGTCTCTAGAACGGAAGGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:3221
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:82
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:82

Suggested primers for confirmation by PCR

Suggested primer 1:CAGTTGAAGCTCCTGCAGGA
Suggested primer 2:TATGCGCCTTCTGTGTGTGT