Insertion junction: CLIP2.047312_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.047312
Chromosome:chromosome 1
Location:1508977
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g008100 (1 of 34) IPR000571 - Zinc finger, CCCH-type intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGCGGGAAGCAGGGTAGCAGGGCGGGCAGGGCGAGAGGCAGGGCAGCAG
Internal bar code:AGTGTAGTCAACGTCTTACAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1790
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:GGCATCATCATCATTCGCGG
Suggested primer 2:ATCCCATGCTACCAGGACCT