Insertion junction: CLIP2.047328_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.047328
Chromosome:chromosome 12
Location:4258074
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre12.g518350 CYG18 (1 of 2) IPR001054//IPR029016//IPR029787 - Adenylyl cyclase class-3/4/guanylyl cyclase // GAF domain-like // Nucleotide cyclase; Adenylate/guanylate cyclase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGGTAGTGGTCCGCGGTGGGGCTGGCAGGGCATGCGTAGCGGCATGACT
Internal bar code:GGGGTTTGTGGTAGTGAGAAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1128
LEAP-Seq percent confirming:10.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:GTGTTGGTTGAGCCGTTGAC
Suggested primer 2:GGGAGAGTGAGGGTGGAGAT