Insertion junction: CLIP2.047335_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.047335
Chromosome:chromosome 3
Location:5337262
Confidence (%):80
Locus systematic id Locus common name Defline Feature
lncRNA_TCONS_00234526

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTAGCCTTTATCAATTCAAGTACGTAAGGTGGCCGGGGCTGAGCAATAT
Internal bar code:ACACGTACGCGGGTCGATATCT

Confirmation - LEAP-Seq

LEAP-Seq distance:1391
LEAP-Seq percent confirming:10.2564
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:35
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:CATACGGCGTGTGCTCAATG
Suggested primer 2:AAGCAACATCCGGCTGTACA