Insertion junction: CLIP2.047340_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.047340
Chromosome:chromosome 8
Location:1146054
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g362950 (1 of 3) IPR002202 - Hydroxymethylglutaryl-CoA reductase, class I/II intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGGCGTGGCGAGTAGCTAGCCACCGACCACCGATGTCGTGCATGGACGA
Internal bar code:AATTGTAAGCATGGTAGGTGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:5822
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:80
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:80

Suggested primers for confirmation by PCR

Suggested primer 1:TTCTTACCACCCGTGTGACG
Suggested primer 2:GATGGCGTCGATGGATGTCT