Insertion junction: CLIP2.047344_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.047344
Chromosome:chromosome 7
Location:4132617
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g342550 SMM28 S-adenosyl-L-methionine-dependent methyltransferase; (1 of 1) PTHR10108:SF827 - METHYLTRANSFERASE-LIKE PROTEIN-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGTTGGGCGCAAGGTCGTAAGGCAAGGCTGCCACAGCGTATGGCTTCTG
Internal bar code:TTCGCATCGCTCCATTTCTCGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1012
LEAP-Seq percent confirming:38.4615
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:40
LEAP-Seq n unique pos:65

Suggested primers for confirmation by PCR

Suggested primer 1:ACTACCTGCCGAGAAGCCTA
Suggested primer 2:CCAGCAACTCCATTCCCCAT