Insertion junction: CLIP2.047347_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.047347
Chromosome:chromosome 4
Location:1269880
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre04.g214850 (1 of 1) IPR000104//IPR000253 - Antifreeze protein, type I // Forkhead-associated (FHA) domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGCAGAGGAGCGGCTAGGCGCAGGGGCCAGCTGGGCGGCAGGGAATGTG
Internal bar code:TGAAGCACATCATGGCAAGCCA

Confirmation - LEAP-Seq

LEAP-Seq distance:537
LEAP-Seq percent confirming:81.8182
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:TGGAGGACTCTGGTGCGATA
Suggested primer 2:TGCACTTGTGCCTGTTGTTG