Insertion junction: CLIP2.047375_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.047375
Chromosome:chromosome 6
Location:5629023
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g287600 (1 of 7) PF12796//PF13637 - Ankyrin repeats (3 copies) (Ank_2) // Ankyrin repeats (many copies) (Ank_4) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGTGAGTCGATGACACGAGCTCCGGGTGACGTGCAGCGCAGGGAGGCAG
Internal bar code:GGGACAACTTTGGGAAATTGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:790
LEAP-Seq percent confirming:23.5294
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:CTCTTGAAGTAGGTGCCGCA
Suggested primer 2:AAGCGGAGAAAGGAACGGAG