Insertion junction: CLIP2.047384_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.047384
Chromosome:chromosome 2
Location:2277333
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g800195 (1 of 2) K01148 - poly(A)-specific ribonuclease (PARN) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGGCGGAACAGGTGGGGGCAGCAGCGTGTGTGTGTATGTGTGTGTGTGT
Internal bar code:AGCCAATAGTTGGTGTCTCACT

Confirmation - LEAP-Seq

LEAP-Seq distance:776
LEAP-Seq percent confirming:17.6471
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:14
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:ACGCTCAGTACGACAGCAAA
Suggested primer 2:CTTTGTGATTGGGCAGGTGC