Insertion junction: CLIP2.047385_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.047385
Chromosome:chromosome 1
Location:2577164
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g015200 PDE4 (1 of 17) 3.1.4.53 - 3',5'-cyclic-AMP phosphodiesterase / cAMP-specific phosphodiesterase; 3'%252C5'-cyclic-nucleotide phosphodiesterase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCTAGCCCACCCCGGACATAACTCTTAAGTGTTGCAGGCGTTAAAAGGG
Internal bar code:GTGAGTCGCTACCTGCTTTGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1848
LEAP-Seq percent confirming:56.6667
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:GATGAAGATAGGCCGTCGCA
Suggested primer 2:TCTCGCACATACGGTATGCC