Insertion junction: CLIP2.047388_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.047388
Chromosome:chromosome 13
Location:2376873
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g579200 S6K1 (1 of 1) K04688 - p70 ribosomal S6 kinase (RPS6KB); Ribosomal protein S6 kinase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCCGGCCACGTTCTTCCAAGACTTGGCTCCCGGCGCCTGGTTGCCGCCC
Internal bar code:ATGATACGCGACGGTTTCGGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1694
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:TGCAACTTCAAGCGTTCTGC
Suggested primer 2:GAATGCGGGCTTCAGTGAAC