Insertion junction: CLIP2.047390_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.047390
Chromosome:chromosome 3
Location:5118119
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g180650 DEG7 (1 of 2) PTHR22939//PTHR22939:SF66 - SERINE PROTEASE FAMILY S1C HTRA-RELATED // PRO-APOPTOTIC SERINE PROTEASE NMA111; Deg protease CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGCAGCAGCTCGTCCAGGTCGTCAGACTGAAGGGCGGGTGGGGAGCAAG
Internal bar code:ATGGGTAAAAGCTTCGGTTTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:2739
LEAP-Seq percent confirming:60.0
LEAP-Seq n confirming:51
LEAP-Seq n nonconfirming:34
LEAP-Seq n unique pos:85

Suggested primers for confirmation by PCR

Suggested primer 1:GTACTGGACGCGGGACTATG
Suggested primer 2:AATGACAGGTTGACGTCGCA