Insertion junction: CLIP2.047395_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.047395
Chromosome:chromosome 6
Location:4716198
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g279183 GEX150 (1 of 1) PF09808 - Small nuclear RNA activating complex (SNAPc), subunit SNAP43 (SNAPc_SNAP43) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGCGGGTTGCAGTCGCTGGCACTCCGACTCCAGTCCCTCCGTCCTCTTC
Internal bar code:GGTAGATGTTCGGGAATCGCCA

Confirmation - LEAP-Seq

LEAP-Seq distance:3538
LEAP-Seq percent confirming:73.0769
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:GGCAGAATTTAGCCGCATCG
Suggested primer 2:CTCGCTTCTATCACCACCCC