Insertion junction: CLIP2.047398_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.047398
Chromosome:chromosome 1
Location:2898112
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g018050 NEF1 (1 of 1) PTHR35313//PTHR35313:SF1 - FAMILY NOT NAMED // NO EXINE FORMATION 1; NEF1-like protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGTGCACTCGGATGGGGTGCGCTGGTATGGGGTGCATGCGTATGGGGCT
Internal bar code:AACGTACTTTCTAAGGCAACTC

Confirmation - LEAP-Seq

LEAP-Seq distance:440
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:GTTGCTGTGGCTCAAATGCA
Suggested primer 2:CCTACATCTCCATCACGCCC