Insertion junction: CLIP2.047408_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.047408
Chromosome:chromosome 10
Location:2350566
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g434700 (1 of 11) IPR017956 - AT hook, DNA-binding motif CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGTCGCCAGGTCAGCCCGTCGCCGGCACGACTGGCGGGGGCCGGGGCCG
Internal bar code:TGATCTGCAATTGTTGCCGTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2788
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:40
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:CTGCCGGAACACAAAACAGG
Suggested primer 2:GGAGATGACGGTCTGGTTGG