Insertion junction: CLIP2.047414_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.047414
Chromosome:chromosome 17
Location:3826374
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g727300 NFO2 (1 of 3) 1.3.1.42 - 12-oxophytodienoate reductase; NADH:flavin oxidoreductase/NADH oxidase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGACACGCGACCTGCGCATGCATGCATGCATGTGTGTTAAAAAGCACAA
Internal bar code:TAGAGCGATGACCCAAAAGCCT

Confirmation - LEAP-Seq

LEAP-Seq distance:4391
LEAP-Seq percent confirming:90.1639
LEAP-Seq n confirming:55
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:61

Suggested primers for confirmation by PCR

Suggested primer 1:GCTCACAAACGTGCAACCAT
Suggested primer 2:CAACAGGCAGCTTCCACAAC