Insertion junction: CLIP2.047415_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.047415
Chromosome:chromosome 16
Location:1003107
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g649000 (1 of 55) PTHR23257//PTHR23257:SF394 - SERINE-THREONINE PROTEIN KINASE // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTCACCAGGTTGGGCTGGCCGTCCGGCCCCTGCAGCATGTGGTTCTCCA
Internal bar code:CAGGTCTCAGTTGACTTGCGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1856
LEAP-Seq percent confirming:32.7869
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:41
LEAP-Seq n unique pos:61

Suggested primers for confirmation by PCR

Suggested primer 1:GCCGCGTGTCACATGAATAC
Suggested primer 2:CTGTGTGCGATATGTGCAGC