Insertion junction: CLIP2.047418_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.047418
Chromosome:chromosome 3
Location:4348234
Confidence (%):80
Locus systematic id Locus common name Defline Feature
lncRNA_TCONS_00068832

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGCCGCCTCCGCCTGCCCCGCCGCCTGCCCTGCCGCCCCACTGGCGAAG
Internal bar code:CGGTTAAATTTCCCACAGCAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:2216
LEAP-Seq percent confirming:12.7273
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:48
LEAP-Seq n unique pos:55

Suggested primers for confirmation by PCR

Suggested primer 1:GCTCAACGGCTGCATACATG
Suggested primer 2:CCAGGTCGTCAAGCATCAGT