Insertion junction: CLIP2.047422_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.047422
Chromosome:chromosome 2
Location:828647
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g800173 (1 of 24) IPR003882//IPR024616 - Pistil-specific extensin-like protein // Pherophorin CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGAAGACTCAAAGTTGACCTTGTAGGGTGAGCAGGCGCAGTCATAGTCA
Internal bar code:CCCTCAAGCGCTCCCCGAGAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2071
LEAP-Seq percent confirming:63.4921
LEAP-Seq n confirming:40
LEAP-Seq n nonconfirming:23
LEAP-Seq n unique pos:63

Suggested primers for confirmation by PCR

Suggested primer 1:ACGCGCCTTTCAAAGCATTT
Suggested primer 2:CGTTGTTGCCCTTGAGGTTG