Insertion junction: CLIP2.047435_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.047435
Chromosome:chromosome 6
Location:3058237
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g274950 (1 of 1) K18953 - factor associated with neutral sphingomyelinase activation (NSMAF, FAN) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGGGGCTTGGGTTTGAGGTTGCGACATGCTAGGCGACGGAGGCAAAGCT
Internal bar code:TGAAGTGCCCTGTTCCCGGGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:168
LEAP-Seq percent confirming:89.4737
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:ACACTGTAGGCGTGAGTGTG
Suggested primer 2:CTCCCCTTGATCTGCTGCAA