Insertion junction: CLIP2.047457_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.047457
Chromosome:chromosome 17
Location:674059
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g700500 (1 of 1) PTHR23196//PTHR23196:SF13 - PAX TRANSCRIPTION ACTIVATION DOMAIN INTERACTING PROTEIN // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCCAGCAACCACCGCTTGCAGCGGCGGCTGCTCCGCAGCCCACTTCGAG
Internal bar code:GGGCAGTCACTTCAAAGGCTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:113
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:CAGGGACAGAAGGAACGCAA
Suggested primer 2:CATCAGACCCAGCACCACAT