Insertion junction: CLIP2.047470_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.047470
Chromosome:chromosome 16
Location:4790047
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g687650 ANK20 Predicted protein with ankyrin repeats; (1 of 78) IPR002110//IPR020683 - Ankyrin repeat // Ankyrin repeat-containing domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTCTGCCTAACCTTCCCTCATAACCCAGACCCAACCTGCTTGTACCCCA
Internal bar code:ACTACGTGCTCAACTTGGTTCC

Confirmation - LEAP-Seq

LEAP-Seq distance:179
LEAP-Seq percent confirming:9.09091
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:CACTTAACAGTGCGGGTTGC
Suggested primer 2:CGCTGCCATCACTGTAATGC