Insertion junction: CLIP2.047470_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.047470
Chromosome:chromosome 16
Location:4790047
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g687650 ANK20 Predicted protein with ankyrin repeats; (1 of 78) IPR002110//IPR020683 - Ankyrin repeat // Ankyrin repeat-containing domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGGTCGGCGGGTGGCGGGTGGCGGGGGAGCAGAAACGCGCAAGGACACG
Internal bar code:ACTACGTGCTCAACTTGGTTCC

Confirmation - LEAP-Seq

LEAP-Seq distance:3165
LEAP-Seq percent confirming:65.5172
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:CGCTGCCATCACTGTAATGC
Suggested primer 2:CACTTAACAGTGCGGGTTGC