Insertion junction: CLIP2.047476_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.047476
Chromosome:chromosome 13
Location:1589840
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g573150 FPN5 Purine 5'-nucleotidase; (1 of 1) PTHR12103:SF15 - PROTEIN Y71H10B.1, ISOFORM C intron
lncRNA_TCONS_00018625 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCATGGCGCATGTCTGGTCATGGACAGGGCAGTGCAGGGAACAGACGGG
Internal bar code:GATATGCGATGCTGCCCGGGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2223
LEAP-Seq percent confirming:31.8182
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:AGAGGGGGCTACAGCATACA
Suggested primer 2:GTGTCGGGACTGAAGCAAGA