Insertion junction: CLIP2.047478_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.047478
Chromosome:chromosome 6
Location:5565470
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g287150 (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGCGGATTCGCGGCGCCTGTGGCATCTCTCCCGGCGGGCGGTGAGGATA
Internal bar code:AGTATAGTTGGTACCATTTCAC

Confirmation - LEAP-Seq

LEAP-Seq distance:3150
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:51
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:51

Suggested primers for confirmation by PCR

Suggested primer 1:TATCTGTGAGGCGTCGATGC
Suggested primer 2:GGAGCTTGGAGTTTGAGGCT