Insertion junction: CLIP2.047492_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.047492
Chromosome:chromosome 10
Location:3395401
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g443900 BOR1 (1 of 1) PF00955 - HCO3- transporter family (HCO3_cotransp); Borate transporter intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTCAAACCAGCAACACCAGAAGCTGCACTCGGGTCCCTCACCATGTCCG
Internal bar code:CGGCAACCATTGGGAGTCGATT

Confirmation - LEAP-Seq

LEAP-Seq distance:278
LEAP-Seq percent confirming:7.14286
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:TCCGAAGCCATGTCAGCATT
Suggested primer 2:TTTCGACTGGACCCTAACGC