Insertion junction: CLIP2.047500_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.047500
Chromosome:chromosome 12
Location:1216703
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g490200 (1 of 1) PTHR24362//PTHR24362:SF160 - SERINE/THREONINE-PROTEIN KINASE NEK // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTCTGCCAACCAGCTGCTGCGTGCGGAGGGTGAAGTCATGTTCCAGCTG
Internal bar code:GAGCTTAGTTCTGACACGTAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:3775
LEAP-Seq percent confirming:61.5385
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:CAGGACGTTGTCGGTCTTCA
Suggested primer 2:GCACTGTCACTAAGCCCAGT