Insertion junction: CLIP2.047500_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.047500
Chromosome:chromosome 12
Location:1216703
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g490200 (1 of 1) PTHR24362//PTHR24362:SF160 - SERINE/THREONINE-PROTEIN KINASE NEK // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCAGTCGCTGTCGCTGTCGCAGTCGTTATCGGAGTCGTTGTCAGAGTCG
Internal bar code:GAGCTTAGTTCTGACACGTAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:259
LEAP-Seq percent confirming:10.3448
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:26
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:GCACTGTCACTAAGCCCAGT
Suggested primer 2:CAGGACGTTGTCGGTCTTCA