Insertion junction: CLIP2.047508_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.047508
Chromosome:chromosome 6
Location:6348635
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g293100 (1 of 2) PTHR19957:SF124 - SYNTAXIN-8B-RELATED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTTCAAGCAGCACTATCTCAGGACTCAAGATAACAAAGTCATCTCATAC
Internal bar code:CCAAGTATGGAGTTATCCTTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:920
LEAP-Seq percent confirming:95.4545
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:TGTGCGGTAGTCAGTGTCAC
Suggested primer 2:TTCCCGTAATATGACGCCGG