Insertion junction: CLIP2.047511_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.047511
Chromosome:chromosome 3
Location:5117244
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g180650 DEG7 (1 of 2) PTHR22939//PTHR22939:SF66 - SERINE PROTEASE FAMILY S1C HTRA-RELATED // PRO-APOPTOTIC SERINE PROTEASE NMA111; Deg protease intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAAACCTGCAGAAGGCGCCACGCATCGCCGCACCTCTGCCAACATGCCAA
Internal bar code:TATTGATTTGGGATATATTGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2467
LEAP-Seq percent confirming:76.9231
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:AAAGCTTGCTTGCAACTGGG
Suggested primer 2:GACCAGTCAACCGCACTGTA