Insertion junction: CLIP2.047511_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.047511
Chromosome:chromosome 3
Location:5117424
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g180650 DEG7 (1 of 2) PTHR22939//PTHR22939:SF66 - SERINE PROTEASE FAMILY S1C HTRA-RELATED // PRO-APOPTOTIC SERINE PROTEASE NMA111; Deg protease intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGTAGGGCAGCAGCTCGGCGGCGCGCACCTTGGCGCGCGCCTCGGGCGG
Internal bar code:ACTGGTTCACTTCGGATAACGC

Confirmation - LEAP-Seq

LEAP-Seq distance:3531
LEAP-Seq percent confirming:96.4286
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:GACCAGTCAACCGCACTGTA
Suggested primer 2:AAAGCTTGCTTGCAACTGGG